HDDC3

General Information

Full gene name:HD domain containing 3
Entrez Gene ID:374659
Location:15q26.1
Synonyms:MESH1
Type:protein-coding

User SNPs

SNPs given by the user that are near or inside this gene:

SNP Distance (bp) Direction
rs8042680 45563 upstream

NCBI Summary

None available.

OMIM

No OMIM data available for this gene.

NCBI Phenotypes

No phenotypes found linked to this gene.

Gene Ontology

  • guanosine-3’,5’-bis(diphosphate) 3’-diphosphatase activity
  • metal ion binding
  • phosphoric diester hydrolase activity

GeneRIFs

  • Affinity Capture-MS [PMID 21890473]
  • Two-hybrid [PMID 16189514]
  • Mesh1, encoded by HDDC3 in humans, contains an active site for ppGpp hydrolysis and a conserved His-Asp-box motif for Mn(2+) binding. It catalyzes hydrolysis of ppGpp both in vitro and in vivo. [PMID 20818390]

PubMed Articles

Recent articles:

  • Wagner SA et al. “A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.” Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. PMID 21890473
  • Sun D et al. “A metazoan ortholog of SpoT hydrolyzes ppGpp and functions in starvation responses.” Nat Struct Mol Biol. 2010 Oct;17(10):1188-94. PMID 20818390
  • Lamesch P et al. “hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes.” Genomics. 2007 Mar;89(3):307-15. PMID 17207965
  • Zody MC et al. “Analysis of the DNA sequence and duplication history of human chromosome 15.” Nature. 2006 Mar 30;440(7084):671-5. PMID 16572171
  • Rual JF et al. “Towards a proteome-scale map of the human protein-protein interaction network.” Nature. 2005 Oct 20;437(7062):1173-8. PMID 16189514
  • Gerhard DS et al. “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).” Genome Res. 2004 Oct;14(10B):2121-7. PMID 15489334
  • Ota T et al. “Complete sequencing and characterization of 21,243 full-length human cDNAs.” Nat Genet. 2004 Jan;36(1):40-5. PMID 14702039
  • Strausberg RL et al. “Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.” Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. PMID 12477932

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